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Commits on Sep 22, 2023

• Update adni_fmri.py

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  jhstat

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• Update adni_utils.py

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  jhstat

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Commits on Sep 15, 2023

• FIX: Do not check for `ANTSPATH` anymore (#973)

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  NicolasGensollen

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Commits on Sep 12, 2023

• [TEST] Make IOtools non regression tests "fast" tests (#972)

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  NicolasGensollen

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• [REF] Refactor AIBL utils (#956)

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  NicolasGensollen

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Commits on Sep 11, 2023

• Bump actions/checkout from 3 to 4 (#970)

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  dependabot[bot]

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Commits on Sep 8, 2023

• ADNI2BIDS: Log when dataframes extracted from clinical data are empty (#969)

  NicolasGensollen

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• Release `0.7.6` (#968)

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  NicolasGensollen

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• [FIX] DWI preprocessing using T1 pipeline not generating bvec file (#967)

  NicolasGensollen

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Commits on Sep 6, 2023

• MNT: Fix lock file checking (#965)

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  ghisvail

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Commits on Sep 5, 2023

• [INFRA] Add `MRtrix3` to conda environnement (#964)

  NicolasGensollen

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• Bump pygments from 2.13.0 to 2.15.0 (#963)

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  dependabot[bot]

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• MNT: Bump pybids version to 0.16 (#962)

  ghisvail

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Commits on Aug 24, 2023

• [FIX] No failure when creation date is not null and other improvements to `_check_derived_image_xml` (#957)

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  NicolasGensollen

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• [FIX] Fix BIDS violations in adni to bids converter (#959)

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  NicolasGensollen

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Commits on Aug 17, 2023

• [MAINT] Bump `certifi` to `2023.7.22` (#954)

  NicolasGensollen

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Commits on Jul 10, 2023

• MNT: Bump scikit-image to 0.21 and lxml to 4.9.3 (#950)

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  ghisvail

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Commits on Jul 7, 2023

• Bump scipy from 1.9.3 to 1.10.0 (#949)

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  dependabot[bot]

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Commits on Jul 3, 2023

• [REF, TEST] Add tests and refactor adni utility `get_closest_visit` (#928)

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  NicolasGensollen

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Commits on Jun 30, 2023

• [REF TEST] Refactor `compute_default_filename` (#947)

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  NicolasGensollen

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• [TEST] Add unit tests for StatisticsVolume utility functions (#907)

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  NicolasGensollen

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Commits on Jun 28, 2023

• [CI] try running anat daily non regression tests sequentially on Linux (#948)

  NicolasGensollen

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Commits on Jun 26, 2023

• [MAINT] Remove `create_phase_in_radsec` and `resample_fmap_to_b0` (#945)

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  NicolasGensollen

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• [MAINT] remove `get_sessions_map_AIBL` (#946)

  NicolasGensollen

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Commits on Jun 22, 2023

• [TEST] Add unit test for longitudinal utils (#944)

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  NicolasGensollen

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Commits on Jun 16, 2023

• [ENH] Enable the `clinica_file_reader` to work with run numbers (#943)

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  NicolasGensollen

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  ghisvail

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Commits on Jun 15, 2023

• ADNI Pet uniform (#703)

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Commits on Jun 14, 2023

• [ENH] Improve BIDS compatibility of `T1Linear` and `FLAIRLinear` CAPS outputs (#940)

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  NicolasGensollen

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Commits on Jun 13, 2023

• [CI] Fix the destination folder to deploy the documentation (#938)

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  mdiazmel

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Commits on Jun 9, 2023

• [ENH] Improve BIDS compatibility of `PetLinear` CAPS output (#935)

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  NicolasGensollen

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Commits on Jun 7, 2023

• [TEST] Add unit tests for groups utils (#937)

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  NicolasGensollen

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Commits on Jun 5, 2023

• Release `0.7.5` (#936)

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  NicolasGensollen

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• [GENFI] add try/except to get EchoTime and RepetitionTime (#934)

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  MatthieuJoulot

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  NicolasGensollen

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• [TEST] Add unit tests for function `container_from_filename` (#933)

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  NicolasGensollen

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• [GENFI] Handle T1 converted as T2 (#930)

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  MatthieuJoulot

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  NicolasGensollen

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